Louis Collins - profile revision

Technical support Web support
1

Dr. Louis Collins uses computerized image processing techniques such as non-linear image registration and model-based segmentation to automatically identify structures within the human brain. These techniques are applied to a large data base of magnetic resonance (MR) data from normal subjects to quantify anatomical variability. In image-guided neurosurgery (IGNS), these techniques provide the surgeon with computerized tools to asist in interpreting anatomical, functional and vascular image date, permitting the effective planning and execution of minimally invasive neurosurgical procedures. Automated atlasing is essential in IGNS for thalamotomy and pallidotomy in the treatment of Parkinson’s disease, or temporal-lobe depth electrode implantation in the diagnosis of epilepsy, since tissue targets in these procedures cannot be viewed directly on MR. Computerized atlasing minimizes trauma to the patient and allows resection of the smallest amount of brain tissue necessary for effective therapeutic treatment.

Selected Publications:

  • Dadar, M., Maranzano, J., Ducharme, S., Carmichael, O. T., Decarli, C., Collins, D. L., & Alzheimer’s Disease Neuroimaging Initiative. (2018). Validation of T1w-based segmentations of white matter hyperintensity volumes in large-scale datasets of aging. Human Brain Mapping, 39(3), 1093-1107. 10.1002/hbm.23894 Link to item
  • De Leener, B., Fonov, V. S., Collins, D. L., Callot, V., Stikov, N., & Cohen-Adad, J. (2018). PAM50: Unbiased multimodal template of the brainstem and spinal cord aligned with the ICBM152 space. Neuroimage, 165, 170-179. S1053-8119(17)30868-6 [pii]Link to item
  • Drouin, S., & Collins, D. L. (2018). PRISM: An open source framework for the interactive design of GPU volume rendering shaders. PloS One, 13(3), e0193636. 10.1371/journal.pone.0193636 Link to item
  • Gerard, I. J., Kersten-Oertel, M., Drouin, S., Hall, J. A., Petrecca, K., De Nigris, D., . . . Collins, D. L. (2018). Combining intraoperative ultrasound brain shift correction and augmented reality visualizations: A pilot study of eight cases. Journal of Medical Imaging (Bellingham, Wash.), 5(2), 021210. 10.1117/1.JMI.5.2.021210 Link to item
  • Sanford, R., Fellows, L. K., Ances, B. M., & Collins, D. L. (2018). Association of brain structure changes and cognitive function with combination antiretroviral therapy in HIV-positive individuals. JAMA Neurology, 75(1), 72-79. 10.1001/jamaneurol.2017.3036 Link to item
  • Albaugh, M. D., Nguyen, T. V., Ducharme, S., Collins, D. L., Botteron, K. N., D’Alberto, N., . . . Brain Development Cooperative Group. (2017). Age-related volumetric change of limbic structures and subclinical anxious/depressed symptomatology in typically developing children and adolescents. Biological Psychology, 124, 133-140. S0301-0511(17)30029-7 [pii]Link to item
  • Aubert-Broche, B., Weier, K., Longoni, G., Fonov, V. S., Bar-Or, A., Marrie, R. A., . . . Canadian Pediatric Demyelinating Disease Network. (2017). Monophasic demyelination reduces brain growth in children. Neurology, 88(18), 1744-1750. 10.1212/WNL.0000000000003884 Link to item
  • Bosco, P., Redolfi, A., Bocchetta, M., Ferrari, C., Mega, A., Galluzzi, S., . . . Frisoni, G. B. (2017). The impact of automated hippocampal volumetry on diagnostic confidence in patients with suspected alzheimer’s disease: A european alzheimer’s disease consortium study. Alzheimer’s & Dementia : The Journal of the Alzheimer’s Association, 13(9), 1013-1023. S1552-5260(17)30045-6 [pii]Link to item
  • Dadar, M., Maranzano, J., Misquitta, K., Anor, C. J., Fonov, V. S., Tartaglia, M. C., . . . Alzheimer’s Disease Neuroimaging Initiative. (2017). Performance comparison of 10 different classification techniques in segmenting white matter hyperintensities in aging. Neuroimage, 157, 233-249. S1053-8119(17)30478-0 [pii]Link to item
  • Dadar, M., Pascoal, T. A., Manitsirikul, S., Misquitta, K., Fonov, V. S., Tartaglia, M. C., . . . Collins, D. L. (2017). Validation of a regression technique for segmentation of white matter hyperintensities in alzheimer’s disease. IEEE Transactions on Medical Imaging, 36(8), 1758-1768. 10.1109/TMI.2017.2693978 Link to item
  • Das, S., Glatard, T., Rogers, C., Saigle, J., Paiva, S., MacIntyre, L., . . . Evans, A. C. (2017). Cyberinfrastructure for open science at the montreal neurological institute. Frontiers in Neuroinformatics, 10, 53. 10.3389/fninf.2016.00053 Link to item
  • Drouin, S., Kochanowska, A., Kersten-Oertel, M., Gerard, I. J., Zelmann, R., De Nigris, D., . . . Collins, D. L. (2017). IBIS: An OR ready open-source platform for image-guided neurosurgery. International Journal of Computer Assisted Radiology and Surgery, 12(3), 363-378. 10.1007/s11548-016-1478-0 Link to item
  • Ewert, S., Plettig, P., Li, N., Chakravarty, M. M., Collins, D. L., Herrington, T. M., . . . Horn, A. (2017). Toward defining deep brain stimulation targets in MNI space: A subcortical atlas based on multimodal MRI, histology and structural connectivity. Neuroimage, S1053-8119(17)30407-X [pii]Link to item
  • Gerard, I. J., Kersten-Oertel, M., Petrecca, K., Sirhan, D., Hall, J. A., & Collins, D. L. (2017). Brain shift in neuronavigation of brain tumors: A review. Medical Image Analysis, 35, 403-420. S1361-8415(16)30156-6 [pii]Link to item
  • Hazlett, H. C., Gu, H., Munsell, B. C., Kim, S. H., Styner, M., Wolff, J. J., . . . Statistical Analysis. (2017). Early brain development in infants at high risk for autism spectrum disorder. Nature, 542(7641), 348-351. 10.1038/nature21369 Link to item
  • Leger, E., Drouin, S., Collins, D. L., Popa, T., & Kersten-Oertel, M. (2017). Quantifying attention shifts in augmented reality image-guided neurosurgery. Healthcare Technology Letters, 4(5), 188-192. 10.1049/htl.2017.0062 Link to item
  • Lewis, J. D., Evans, A. C., Pruett, J. R.,Jr, Botteron, K. N., McKinstry, R. C., Zwaigenbaum, L., . . . Infant Brain Imaging Study Network. (2017). The emergence of network inefficiencies in infants with autism spectrum disorder. Biological Psychiatry, 82(3), 176-185. S0006-3223(17)31361-6 [pii]Link to item
  • Nguyen, T. V., Lew, J., Albaugh, M. D., Botteron, K. N., Hudziak, J. J., Fonov, V. S., . . . McCracken, J. T. (2017). Sex-specific associations of testosterone with prefrontal-hippocampal development and executive function. Psychoneuroendocrinology, 76, 206-217. S0306-4530(16)30999-4 [pii]Link to item
  • Nguyen, T. V., Wu, M., Lew, J., Albaugh, M. D., Botteron, K. N., Hudziak, J. J., . . . McCracken, J. T. (2017). Dehydroepiandrosterone impacts working memory by shaping cortico-hippocampal structural covariance during development. Psychoneuroendocrinology, 86, 110-121. S0306-4530(17)30549-8 [pii]Link to item
  • Sanford, R., Fernandez Cruz, A. L., Scott, S. C., Mayo, N. E., Fellows, L. K., Ances, B. M., & Collins, D. L. (2017). Regionally specific brain volumetric and cortical thickness changes in HIV-infected patients in the HAART era. Journal of Acquired Immune Deficiency Syndromes (1999), 74(5), 563-570. 10.1097/QAI.0000000000001294 Link to item
  • Schoemaker, D., Mascret, C., Collins, D. L., Yu, E., Gauthier, S., & Pruessner, J. C. (2017). Recollection and familiarity in aging individuals: Gaining insight into relationships with medial temporal lobe structural integrity. Hippocampus, 27(6), 692-701. 10.1002/hipo.22725 Link to item
  • Schoemaker, D., Poirier, J., Collins, D. L., Gauthier, S., & Pruessner, J. C. (2017). Familiarity deficits in cognitively normal aging individuals with APOE epsilon4: A follow-up investigation of medial temporal lobe structural correlates. Alzheimer’s & Dementia (Amsterdam, Netherlands), 9, 21-24. 10.1016/j.dadm.2017.05.008 Link to item
  • Tuwaig, M., Savard, M., Jutras, B., Poirier, J., Collins, D. L., Rosa-Neto, P., . . . PREVENT-AD Research Group. (2017). Deficit in central auditory processing as a biomarker of pre-clinical alzheimer’s disease. Journal of Alzheimer’s Disease : JAD, 60(4), 1589-1600. 10.3233/JAD-170545 Link to item
  • Valk, S. L., Bernhardt, B. C., Trautwein, F. M., Bockler, A., Kanske, P., Guizard, N., . . . Singer, T. (2017). Structural plasticity of the social brain: Differential change after socio-affective and cognitive mental training. Science Advances, 3(10), e1700489. 10.1126/sciadv.1700489 Link to item
  • Xiao, Y., Fonov, V., Chakravarty, M. M., Beriault, S., Al Subaie, F., Sadikot, A., . . . Collins, D. L. (2017). A dataset of multi-contrast population-averaged brain MRI atlases of a parkinsons disease cohort. Data in Brief, 12, 370-379. 10.1016/j.dib.2017.04.013 Link to item
  • Zandifar, A., Fonov, V., Coupe, P., Pruessner, J., Collins, D. L., & Alzheimer’s Disease Neuroimaging Initiative. (2017). A comparison of accurate automatic hippocampal segmentation methods. Neuroimage, 155, 383-393. S1053-8119(17)30311-7 [pii]Link to item
  • Zeighami, Y., Fereshtehnejad, S. M., Dadar, M., Collins, D. L., Postuma, R. B., Misic, B., & Dagher, A. (2017). A clinical-anatomical signature of parkinson’s disease identified with partial least squares and magnetic resonance imaging. Neuroimage, S1053-8119(17)31074-1 [pii]Link to item
  • Boucetta, S., Salimi, A., Dadar, M., Jones, B. E., Collins, D. L., & Dang-Vu, T. T. (2016). Structural brain alterations associated with rapid eye movement sleep behavior disorder in parkinson’s disease. Scientific Reports, 6, 26782. 10.1038/srep26782 Link to item
  • Giraud, R., Ta, V. T., Papadakis, N., Manjon, J. V., Collins, D. L., Coupe, P., & Alzheimer’s Disease Neuroimaging Initiative. (2016). An optimized PatchMatch for multi-scale and multi-feature label fusion. Neuroimage, 124(Pt A), 770-782. S1053-8119(15)00696-5 [pii]Link to item
  • Kim, S. H., Lyu, I., Fonov, V. S., Vachet, C., Hazlett, H. C., Smith, R. G., . . . IBIS Network. (2016). Development of cortical shape in the human brain from 6 to 24months of age via a novel measure of shape complexity. Neuroimage, 135, 163-176. 10.1016/j.neuroimage.2016.04.053 Link to item
  • Till, C., Noguera, A., Verhey, L. H., O’Mahony, J., Yeh, E. A., Mah, J. K., . . . Banwell, B. L. (2016). Cognitive and behavioral functioning in childhood acquired demyelinating syndromes. Journal of the International Neuropsychological Society : JINS, 22(10), 1050-1060. S1355617716000308 [pii]Link to item
  • Vincent, R. D., Neelin, P., Khalili-Mahani, N., Janke, A. L., Fonov, V. S., Robbins, S. M., . . . Evans, A. C. (2016). MINC 2.0: A flexible format for multi-modal images. Frontiers in Neuroinformatics, 10, 35. 10.3389/fninf.2016.00035 Link to item
  • Weier, K., Fonov, V., Aubert-Broche, B., Arnold, D. L., Banwell, B., & Collins, D. L. (2016). Impaired growth of the cerebellum in pediatric-onset acquired CNS demyelinating disease. Multiple Sclerosis (Houndmills, Basingstoke, England), 22(10), 1266-1278. 10.1177/1352458515615224 Link to item
  • Weier, K., Till, C., Fonov, V., Yeh, E. A., Arnold, D. L., Banwell, B., & Collins, D. L. (2016). Contribution of the cerebellum to cognitive performance in children and adolescents with multiple sclerosis. Multiple Sclerosis (Houndmills, Basingstoke, England), 22(5), 599-607. 10.1177/1352458515595132 Link to item
  • Xiao, Y., Yan, C. X., Drouin, S., De Nigris, D., Kochanowska, A., & Collins, D. L. (2016). User-friendly freehand ultrasound calibration using lego bricks and automatic registration. International Journal of Computer Assisted Radiology and Surgery, 11(9), 1703-1711. 10.1007/s11548-016-1368-5 Link to item
  • Beriault, S., Xiao, Y., Collins, D. L., & Pike, G. B. (2015). Automatic SWI venography segmentation using conditional random fields. IEEE Transactions on Medical Imaging, 34(12), 2478-2491. 10.1109/TMI.2015.2442236 Link to item
  • Boccardi, M., Bocchetta, M., Morency, F. C., Collins, D. L., Nishikawa, M., Ganzola, R., . . . EADC-ADNI Working Group on The Harmonized Protocol for Manual Hippocampal Segmentation and for the Alzheimer’s Disease Neuroimaging Initiative. (2015). Training labels for hippocampal segmentation based on the EADC-ADNI harmonized hippocampal protocol. Alzheimer’s & Dementia : The Journal of the Alzheimer’s Association, 11(2), 175-183. 10.1016/j.jalz.2014.12.002 Link to item
  • Cash, D. M., Frost, C., Iheme, L. O., Unay, D., Kandemir, M., Fripp, J., . . . Ourselin, S. (2015). Assessing atrophy measurement techniques in dementia: Results from the MIRIAD atrophy challenge. Neuroimage, 123, 149-164. 10.1016/j.neuroimage.2015.07.087 Link to item
  • Chakravarty, M. M., Rapoport, J. L., Giedd, J. N., Raznahan, A., Shaw, P., Collins, D. L., . . . Gogtay, N. (2015). Striatal shape abnormalities as novel neurodevelopmental endophenotypes in schizophrenia: A longitudinal study. Human Brain Mapping, 36(4), 1458-1469. 10.1002/hbm.22715 Link to item
  • Coupe, P., Fonov, V. S., Bernard, C., Zandifar, A., Eskildsen, S. F., Helmer, C., . . . Alzheimer’s Disease Neuroimaging Initiative. (2015). Detection of alzheimer’s disease signature in MR images seven years before conversion to dementia: Toward an early individual prognosis. Human Brain Mapping, 36(12), 4758-4770. 10.1002/hbm.22926 Link to item
  • Eskildsen, S. F., Coupe, P., Fonov, V. S., Pruessner, J. C., Collins, D. L., & Alzheimer’s Disease Neuroimaging Initiative. (2015). Structural imaging biomarkers of alzheimer’s disease: Predicting disease progression. Neurobiology of Aging, 36 Suppl 1, S23-31. 10.1016/j.neurobiolaging.2014.04.034 Link to item
  • Faridi, N., Karama, S., Burgaleta, M., White, M. T., Evans, A. C., Fonov, V., . . . Waber, D. P. (2015). Neuroanatomical correlates of behavioral rating versus performance measures of working memory in typically developing children and adolescents. Neuropsychology, 29(1), 82-91. 10.1037/neu0000079 Link to item
  • Gerard, I. J., & Collins, D. L. (2015). An analysis of tracking error in image-guided neurosurgery. International Journal of Computer Assisted Radiology and Surgery, 10(10), 1579-1588. 10.1007/s11548-014-1145-2 Link to item
  • Gerard, I. J., Hall, J. A., Mok, K., & Collins, D. L. (2015). New protocol for skin landmark registration in image-guided neurosurgery: Technical note. Neurosurgery, 11 Suppl 3, 376-80; discussion 380-1. 10.1227/NEU.0000000000000868 Link to item
  • Grover, S. A., Aubert-Broche, B., Fetco, D., Collins, D. L., Arnold, D. L., Finlayson, M., . . . Yeh, E. A. (2015). Lower physical activity is associated with higher disease burden in pediatric multiple sclerosis. Neurology, 85(19), 1663-1669. 10.1212/WNL.0000000000001939 Link to item
  • Guizard, N., Coupe, P., Fonov, V. S., Manjon, J. V., Arnold, D. L., & Collins, D. L. (2015). Rotation-invariant multi-contrast non-local means for MS lesion segmentation. NeuroImage.Clinical, 8, 376-389. 10.1016/j.nicl.2015.05.001 Link to item
  • Guizard, N., Fonov, V. S., Garcia-Lorenzo, D., Nakamura, K., Aubert-Broche, B., & Collins, D. L. (2015). Spatio-temporal regularization for longitudinal registration to subject-specific 3d template. PloS One, 10(8), e0133352. 10.1371/journal.pone.0133352 Link to item
  • Guizard, N., Nakamura, K., Coupe, P., Fonov, V. S., Arnold, D. L., & Collins, D. L. (2015). Non-local means inpainting of MS lesions in longitudinal image processing. Frontiers in Neuroscience, 9, 456. 10.3389/fnins.2015.00456 Link to item
  • Harmouche, R., Subbanna, N. K., Collins, D. L., Arnold, D. L., & Arbel, T. (2015). Probabilistic multiple sclerosis lesion classification based on modeling regional intensity variability and local neighborhood information. IEEE Transactions on Bio-Medical Engineering, 62(5), 1281-1292. 10.1109/TBME.2014.2385635 Link to item
  • Karimaghaloo, Z., Rivaz, H., Arnold, D. L., Collins, D. L., & Arbel, T. (2015). Temporal hierarchical adaptive texture CRF for automatic detection of gadolinium-enhancing multiple sclerosis lesions in brain MRI. IEEE Transactions on Medical Imaging, 34(6), 1227-1241. 10.1109/TMI.2014.2382561 Link to item
  • Kersten-Oertel, M., Gerard, I., Drouin, S., Mok, K., Sirhan, D., Sinclair, D. S., & Collins, D. L. (2015). Augmented reality in neurovascular surgery: Feasibility and first uses in the operating room. International Journal of Computer Assisted Radiology and Surgery, 10(11), 1823-1836. 10.1007/s11548-015-1163-8 Link to item
  • Kim, S. H., Fonov, V., Collins, D. L., Gerig, G., IBIS Network, & Styner, M. A. (2015). Shape index distribution based local surface complexity applied to the human cortex. Proceedings of SPIE–the International Society for Optical Engineering, 9413, 10.1117/12.2081560. 941344 [pii]Link to item
  • Menze, B. H., Jakab, A., Bauer, S., Kalpathy-Cramer, J., Farahani, K., Kirby, J., . . . Van Leemput, K. (2015). The multimodal brain tumor image segmentation benchmark (BRATS). IEEE Transactions on Medical Imaging, 34(10), 1993-2024. 10.1109/TMI.2014.2377694 Link to item
  • Nakamura, K., Brown, R. A., Narayanan, S., Collins, D. L., Arnold, D. L., & Alzheimer’s Disease Neuroimaging Initiative. (2015). Diurnal fluctuations in brain volume: Statistical analyses of MRI from large populations. Neuroimage, 118, 126-132. 10.1016/j.neuroimage.2015.05.077 Link to item
  • Pruett, J. R.,Jr, Kandala, S., Hoertel, S., Snyder, A. Z., Elison, J. T., Nishino, T., . . . Piven, J. (2015). Accurate age classification of 6 and 12 month-old infants based on resting-state functional connectivity magnetic resonance imaging data. Developmental Cognitive Neuroscience, 12, 123-133. 10.1016/j.dcn.2015.01.003 Link to item
  • Rivaz, H., Chen, S. J., & Collins, D. L. (2015). Automatic deformable MR-ultrasound registration for image-guided neurosurgery. IEEE Transactions on Medical Imaging, 34(2), 366-380. 10.1109/TMI.2014.2354352 Link to item
  • Rivaz, H., & Collins, D. L. (2015). Deformable registration of preoperative MR, pre-resection ultrasound, and post-resection ultrasound images of neurosurgery. International Journal of Computer Assisted Radiology and Surgery, 10(7), 1017-1028. 10.1007/s11548-014-1099-4 Link to item
  • Rivaz, H., & Collins, D. L. (2015). Near real-time robust non-rigid registration of volumetric ultrasound images for neurosurgery. Ultrasound in Medicine & Biology, 41(2), 574-587. 10.1016/j.ultrasmedbio.2014.08.013 Link to item
  • Stoyanov, D., Collins, D. L., Sakuma, I., Abolmaesumi, P., & Jannin, P. (2015). Information processing in computer-assisted interventions: 5th international conference, 2014. International Journal of Computer Assisted Radiology and Surgery, 10(9), 1355-1356. 10.1007/s11548-015-1280-4 Link to item
  • Weier, K., Banwell, B., Cerasa, A., Collins, D. L., Dogonowski, A. M., Lassmann, H., . . . Sprenger, T. (2015). The role of the cerebellum in multiple sclerosis. Cerebellum (London, England), 14(3), 364-374. 10.1007/s12311-014-0634-8 Link to item
  • Xiao, Y., Fonov, V., Beriault, S., Al Subaie, F., Chakravarty, M. M., Sadikot, A. F., . . . Collins, D. L. (2015). Multi-contrast unbiased MRI atlas of a parkinson’s disease population. International Journal of Computer Assisted Radiology and Surgery, 10(3), 329-341. 10.1007/s11548-014-1068-y Link to item
  • Xiao, Y., Fonov, V. S., Beriault, S., Gerard, I., Sadikot, A. F., Pike, G. B., & Collins, D. L. (2015). Patch-based label fusion segmentation of brainstem structures with dual-contrast MRI for parkinson’s disease. International Journal of Computer Assisted Radiology and Surgery, 10(7), 1029-1041. 10.1007/s11548-014-1119-4 Link to item
  • Zeighami, Y., Ulla, M., Iturria-Medina, Y., Dadar, M., Zhang, Y., Larcher, K. M., . . . Dagher, A. (2015). Network structure of brain atrophy in de novo parkinson’s disease. Elife, 4, 10.7554/eLife.08440. 10.7554/eLife.08440 Link to item
  • Ameis, S. H., Ducharme, S., Albaugh, M. D., Hudziak, J. J., Botteron, K. N., Lepage, C., . . . Karama, S. (2014). Cortical thickness, cortico-amygdalar networks, and externalizing behaviors in healthy children. Biological Psychiatry, 75(1), 65-72. 10.1016/j.biopsych.2013.06.008 Link to item
  • Aubert-Broche, B., Fonov, V., Narayanan, S., Arnold, D. L., Araujo, D., Fetco, D., . . . Canadian Pediatric Demyelinating Disease Network. (2014). Onset of multiple sclerosis before adulthood leads to failure of age-expected brain growth. Neurology, 83(23), 2140-2146. 10.1212/WNL.0000000000001045 Link to item
  • Belleville, S., Fouquet, C., Duchesne, S., Collins, D. L., & Hudon, C. (2014). Detecting early preclinical alzheimer’s disease via cognition, neuropsychiatry, and neuroimaging: Qualitative review and recommendations for testing. Journal of Alzheimer’s Disease : JAD, 42 Suppl 4, S375-82. 10.3233/JAD-141470 Link to item
  • Beriault, S., Sadikot, A. F., Alsubaie, F., Drouin, S., Collins, D. L., & Pike, G. B. (2014). Neuronavigation using susceptibility-weighted venography: Application to deep brain stimulation and comparison with gadolinium contrast. Journal of Neurosurgery, 121(1), 131-141. 10.3171/2014.3.JNS131860 Link to item
  • Hu, S., Coupe, P., Pruessner, J. C., & Collins, D. L. (2014). Nonlocal regularization for active appearance model: Application to medial temporal lobe segmentation. Human Brain Mapping, 35(2), 377-395. 10.1002/hbm.22183 Link to item
  • Kersten-Oertel, M., Chen, S. J., & Collins, D. L. (2014). An evaluation of depth enhancing perceptual cues for vascular volume visualization in neurosurgery. IEEE Transactions on Visualization and Computer Graphics, 20(3), 391-403. 10.1109/TVCG.2013.240 Link to item
  • MacDonald, P. A., Ganjavi, H., Collins, D. L., Evans, A. C., & Karama, S. (2014). Investigating the relation between striatal volume and IQ. Brain Imaging and Behavior, 8(1), 52-59. 10.1007/s11682-013-9242-3 Link to item
  • Manjon, J. V., Eskildsen, S. F., Coupe, P., Romero, J. E., Collins, D. L., & Robles, M. (2014). Nonlocal intracranial cavity extraction. International Journal of Biomedical Imaging, 2014, 820205. 10.1155/2014/820205 Link to item
  • Pruessner, M., Lepage, M., Collins, D. L., Pruessner, J. C., Joober, R., & Malla, A. K. (2014). Reduced hippocampal volume and hypothalamus-pituitary-adrenal axis function in first episode psychosis: Evidence for sex differences. NeuroImage.Clinical, 7, 195-202. 10.1016/j.nicl.2014.12.001 Link to item
  • Rivaz, H., Karimaghaloo, Z., & Collins, D. L. (2014). Self-similarity weighted mutual information: A new nonrigid image registration metric. Medical Image Analysis, 18(2), 343-358. 10.1016/j.media.2013.12.003 Link to item
  • Rivaz, H., Karimaghaloo, Z., Fonov, V. S., & Collins, D. L. (2014). Nonrigid registration of ultrasound and MRI using contextual conditioned mutual information. IEEE Transactions on Medical Imaging, 33(3), 708-725. 10.1109/TMI.2013.2294630 Link to item
  • Ta, V. T., Giraud, R., Collins, D. L., & Coupe, P. (2014). Optimized patchMatch for near real time and accurate label fusion. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 17(Pt 3), 105-112. Link to item
  • Tomaiuolo, F., Campana, S., Collins, D. L., Fonov, V. S., Ricciardi, E., Sartori, G., . . . Ptito, M. (2014). Morphometric changes of the corpus callosum in congenital blindness. PloS One, 9(9), e107871. 10.1371/journal.pone.0107871 Link to item
  • Weier, K., Fonov, V., Lavoie, K., Doyon, J., & Collins, D. L. (2014). Rapid automatic segmentation of the human cerebellum and its lobules (RASCAL)–implementation and application of the patch-based label-fusion technique with a template library to segment the human cerebellum. Human Brain Mapping, 35(10), 5026-5039. 10.1002/hbm.22529 Link to item
  • Xiao, Y., Jannin, P., D’Albis, T., Guizard, N., Haegelen, C., Lalys, F., . . . Collins, D. L. (2014). Investigation of morphometric variability of subthalamic nucleus, red nucleus, and substantia nigra in advanced parkinson’s disease patients using automatic segmentation and PCA-based analysis. Human Brain Mapping, 35(9), 4330-4344. 10.1002/hbm.22478 Link to item
  • Albaugh, M. D., Ducharme, S., Collins, D. L., Botteron, K. N., Althoff, R. R., Evans, A. C., . . . Brain Development Cooperative Group. (2013). Evidence for a cerebral cortical thickness network anti-correlated with amygdalar volume in healthy youths: Implications for the neural substrates of emotion regulation. Neuroimage, 71, 42-49. 10.1016/j.neuroimage.2012.12.071 Link to item
  • Chakravarty, M. M., Steadman, P., van Eede, M. C., Calcott, R. D., Gu, V., Shaw, P., . . . Lerch, J. P. (2013). Performing label-fusion-based segmentation using multiple automatically generated templates. Human Brain Mapping, 34(10), 2635-2654. 10.1002/hbm.22092 Link to item
  • De Nigris, D., Collins, D. L., & Arbel, T. (2013). Fast rigid registration of pre-operative magnetic resonance images to intra-operative ultrasound for neurosurgery based on high confidence gradient orientations. International Journal of Computer Assisted Radiology and Surgery, 8(4), 649-661. 10.1007/s11548-013-0826-6 Link to item
  • Elliott, C., Arnold, D. L., Collins, D. L., & Arbel, T. (2013). Temporally consistent probabilistic detection of new multiple sclerosis lesions in brain MRI. IEEE Transactions on Medical Imaging, 32(8), 1490-1503. 10.1109/TMI.2013.2258403 Link to item
  • Eskildsen, S. F., Coupe, P., Garcia-Lorenzo, D., Fonov, V., Pruessner, J. C., Collins, D. L., & Alzheimer’s Disease Neuroimaging Initiative. (2013). Prediction of alzheimer’s disease in subjects with mild cognitive impairment from the ADNI cohort using patterns of cortical thinning. Neuroimage, 65, 511-521. 10.1016/j.neuroimage.2012.09.058 Link to item
  • Garcia-Lorenzo, D., Francis, S., Narayanan, S., Arnold, D. L., & Collins, D. L. (2013). Review of automatic segmentation methods of multiple sclerosis white matter lesions on conventional magnetic resonance imaging. Medical Image Analysis, 17(1), 1-18. 10.1016/j.media.2012.09.004 Link to item
  • Haegelen, C., Coupe, P., Fonov, V., Guizard, N., Jannin, P., Morandi, X., & Collins, D. L. (2013). Automated segmentation of basal ganglia and deep brain structures in MRI of parkinson’s disease. International Journal of Computer Assisted Radiology and Surgery, 8(1), 99-110. 10.1007/s11548-012-0675-8 Link to item
  • Haegelen, C., Perucca, P., Chatillon, C. E., Andrade-Valenca, L., Zelmann, R., Jacobs, J., . . . Gotman, J. (2013). High-frequency oscillations, extent of surgical resection, and surgical outcome in drug-resistant focal epilepsy. Epilepsia, 54(5), 848-857. 10.1111/epi.12075 Link to item
  • Hu, S., Pruessner, J. C., Coupe, P., & Collins, D. L. (2013). Volumetric analysis of medial temporal lobe structures in brain development from childhood to adolescence. Neuroimage, 74, 276-287. 10.1016/j.neuroimage.2013.02.032 Link to item
  • Karimaghaloo, Z., Rivaz, H., Arnold, D. L., Collins, D. L., & Arbel, T. (2013). Adaptive voxel, texture and temporal conditional random fields for detection of gad-enhancing multiple sclerosis lesions in brain MRI. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 16(Pt 3), 543-550. Link to item
  • Kersten-Oertel, M., Chen, S. J., & Collins, D. L. (2013). An evaluation of depth enhancing perceptual cues for vascular volume visualization in neurosurgery. IEEE Transactions on Visualization and Computer Graphics, 068A373E-DE10-4BD3-AEC1-132B8B5070AF Link to item
  • Kersten-Oertel, M., Jannin, P., & Collins, D. L. (2013). The state of the art of visualization in mixed reality image guided surgery. Computerized Medical Imaging and Graphics : The Official Journal of the Computerized Medical Imaging Society, 37(2), 98-112. 10.1016/j.compmedimag.2013.01.009 Link to item
  • Kim, S. H., Fonov, V. S., Dietrich, C., Vachet, C., Hazlett, H. C., Smith, R. G., . . . IBIS network. (2013). Adaptive prior probability and spatial temporal intensity change estimation for segmentation of the one-year-old human brain. Journal of Neuroscience Methods, 212(1), 43-55. 10.1016/j.jneumeth.2012.09.018 Link to item
  • Manjon, J. V., Coupe, P., Concha, L., Buades, A., Collins, D. L., & Robles, M. (2013). Diffusion weighted image denoising using overcomplete local PCA. PloS One, 8(9), e73021. 10.1371/journal.pone.0073021 Link to item
  • Mercier, L., Araujo, D., Haegelen, C., Del Maestro, R. F., Petrecca, K., & Collins, D. L. (2013). Registering pre- and postresection 3-dimensional ultrasound for improved visualization of residual brain tumor. Ultrasound in Medicine & Biology, 39(1), 16-29. 10.1016/j.ultrasmedbio.2012.08.004 Link to item
  • Nakamura, K., Guizard, N., Fonov, V. S., Narayanan, S., Collins, D. L., & Arnold, D. L. (2013). Jacobian integration method increases the statistical power to measure gray matter atrophy in multiple sclerosis. NeuroImage.Clinical, 4, 10-17. 10.1016/j.nicl.2013.10.015 Link to item
  • Subbanna, N. K., Precup, D., Collins, D. L., & Arbel, T. (2013). Hierarchical probabilistic gabor and MRF segmentation of brain tumours in MRI volumes. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 16(Pt 1), 751-758. Link to item
  • Till, C., Racine, N., Araujo, D., Narayanan, S., Collins, D. L., Aubert-Broche, B., . . . Banwell, B. (2013). Changes in cognitive performance over a 1-year period in children and adolescents with multiple sclerosis. Neuropsychology, 27(2), 210-219. 10.1037/a0031665 Link to item
  • Beriault, S., Subaie, F. A., Collins, D. L., Sadikot, A. F., & Pike, G. B. (2012). A multi-modal approach to computer-assisted deep brain stimulation trajectory planning. International Journal of Computer Assisted Radiology and Surgery, 7(5), 687-704. 10.1007/s11548-012-0768-4 Link to item
  • Beriault, S., Xiao, Y., Bailey, L., Collins, D. L., Sadikot, A. F., & Pike, G. B. (2012). Towards computer-assisted deep brain stimulation targeting with multiple active contacts. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 15(Pt 1), 487-494. Link to item
  • Chen, S. J., Hellier, P., Marchal, M., Gauvrit, J. Y., Carpentier, R., Morandi, X., & Collins, D. L. (2012). An anthropomorphic polyvinyl alcohol brain phantom based on Colin27 for use in multimodal imaging. Medical Physics, 39(1), 554-561. 10.1118/1.3673069 Link to item
  • Chen, S. J., Reinertsen, I., Coupe, P., Yan, C. X., Mercier, L., Del Maestro, D. R., & Collins, D. L. (2012). Validation of a hybrid doppler ultrasound vessel-based registration algorithm for neurosurgery. International Journal of Computer Assisted Radiology and Surgery, 7(5), 667-685. 10.1007/s11548-012-0680-y Link to item
  • Coupe, P., Eskildsen, S. F., Manjon, J. V., Fonov, V. S., Collins, D. L., & Alzheimer’s disease Neuroimaging Initiative. (2012). Simultaneous segmentation and grading of anatomical structures for patient’s classification: Application to alzheimer’s disease. Neuroimage, 59(4), 3736-3747. 10.1016/j.neuroimage.2011.10.080 Link to item
  • Coupe, P., Eskildsen, S. F., Manjon, J. V., Fonov, V. S., Pruessner, J. C., Allard, M., . . . Alzheimer’s Disease Neuroimaging Initiative. (2012). Scoring by nonlocal image patch estimator for early detection of alzheimer’s disease. NeuroImage.Clinical, 1(1), 141-152. 10.1016/j.nicl.2012.10.002 Link to item
  • Coupe, P., Munz, M., Manjon, J. V., Ruthazer, E. S., & Collins, D. L. (2012). A CANDLE for a deeper in vivo insight. Medical Image Analysis, 16(4), 849-864. 10.1016/j.media.2012.01.002 Link to item
  • De Nigris, D., Collins, D. L., & Arbel, T. (2012). Multi-modal image registration based on gradient orientations of minimal uncertainty. IEEE Transactions on Medical Imaging, 31(12), 2343-2354. 10.1109/TMI.2012.2218116 Link to item
  • Eskildsen, S. F., Coupe, P., Fonov, V., Manjon, J. V., Leung, K. K., Guizard, N., . . . Alzheimer’s Disease Neuroimaging Initiative. (2012). BEaST: Brain extraction based on nonlocal segmentation technique. Neuroimage, 59(3), 2362-2373. 10.1016/j.neuroimage.2011.09.012 Link to item
  • Evans, A. C., Janke, A. L., Collins, D. L., & Baillet, S. (2012). Brain templates and atlases. Neuroimage, 62(2), 911-922. 10.1016/j.neuroimage.2012.01.024 Link to item
  • Hulshoff Pol, H. E., van Baal, G. C., Schnack, H. G., Brans, R. G., van der Schot, A. C., Brouwer, R. M., . . . Kahn, R. S. (2012). Overlapping and segregating structural brain abnormalities in twins with schizophrenia or bipolar disorder. Archives of General Psychiatry, 69(4), 349-359. 10.1001/archgenpsychiatry.2011.1615 Link to item
  • Karimaghaloo, Z., Arnold, D. L., Collins, D. L., & Arbel, T. (2012). Hierarchical conditional random fields for detection of gad-enhancing lesions in multiple sclerosis. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 15(Pt 2), 379-386. Link to item
  • Karimaghaloo, Z., Shah, M., Francis, S. J., Arnold, D. L., Collins, D. L., & Arbel, T. (2012). Automatic detection of gadolinium-enhancing multiple sclerosis lesions in brain MRI using conditional random fields. IEEE Transactions on Medical Imaging, 31(6), 1181-1194. 10.1109/TMI.2012.2186639 Link to item
  • Kersten-Oertel, M., Chen, S. S., Drouin, S., Sinclair, D. S., & Collins, D. L. (2012). Augmented reality visualization for guidance in neurovascular surgery. Studies in Health Technology and Informatics, 173, 225-229. Link to item
  • Kersten-Oertel, M., Jannin, P., & Collins, D. L. (2012). DVV: A taxonomy for mixed reality visualization in image guided surgery. IEEE Transactions on Visualization and Computer Graphics, 18(2), 332-352. 10.1109/TVCG.2011.50 Link to item
  • Mercier, L., Del Maestro, R. F., Petrecca, K., Araujo, D., Haegelen, C., & Collins, D. L. (2012). Online database of clinical MR and ultrasound images of brain tumors. Medical Physics, 39(6), 3253-3261. 10.1118/1.4709600 Link to item
  • Mercier, L., Fonov, V., Haegelen, C., Del Maestro, R. F., Petrecca, K., & Collins, D. L. (2012). Comparing two approaches to rigid registration of three-dimensional ultrasound and magnetic resonance images for neurosurgery. International Journal of Computer Assisted Radiology and Surgery, 7(1), 125-136. 10.1007/s11548-011-0620-2 Link to item
  • Rivaz, H., & Collins, D. L. (2012). Self-similarity weighted mutual information: A new nonrigid image registration metric. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 15(Pt 3), 91-98. Link to item
  • Sprenger, T., Seifert, C. L., Valet, M., Andreou, A. P., Foerschler, A., Zimmer, C., . . . Chakravarty, M. M. (2012). Assessing the risk of central post-stroke pain of thalamic origin by lesion mapping. Brain : A Journal of Neurology, 135(Pt 8), 2536-2545. 10.1093/brain/aws153 Link to item
  • Tardif, C. L., Bedell, B. J., Eskildsen, S. F., Collins, D. L., & Pike, G. B. (2012). Quantitative magnetic resonance imaging of cortical multiple sclerosis pathology. Multiple Sclerosis International, 2012, 742018. 10.1155/2012/742018 Link to item
  • Xiao, Y., Beriault, S., Pike, G. B., & Collins, D. L. (2012). Multicontrast multiecho FLASH MRI for targeting the subthalamic nucleus. Magnetic Resonance Imaging, 30(5), 627-640. 10.1016/j.mri.2012.02.006 Link to item
  • Yan, C. X., Goulet, B., Chen, S. J., Tampieri, D., & Collins, D. L. (2012). Validation of automated ultrasound-CT registration of vertebrae. International Journal of Computer Assisted Radiology and Surgery, 7(4), 601-610. 10.1007/s11548-011-0666-1 Link to item
  • Yan, C. X., Goulet, B., Tampieri, D., & Collins, D. L. (2012). Ultrasound-CT registration of vertebrae without reconstruction. International Journal of Computer Assisted Radiology and Surgery, 7(6), 901-909. 10.1007/s11548-012-0771-9 Link to item
  • Coupe, P., Eskildsen, S. F., Manjon, J. V., Fonov, V., Collins, D. L., & Alzheimer’s Disease Neuroimaging Initiative. (2011). Simultaneous segmentation and grading of hippocampus for patient classification with alzheimer’s disease. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 14(Pt 3), 149-157. Link to item
  • Coupe, P., Manjon, J. V., Fonov, V., Pruessner, J., Robles, M., & Collins, D. L. (2011). Patch-based segmentation using expert priors: Application to hippocampus and ventricle segmentation. Neuroimage, 54(2), 940-954. 10.1016/j.neuroimage.2010.09.018 Link to item
  • Ducharme, S., Hudziak, J. J., Botteron, K. N., Ganjavi, H., Lepage, C., Collins, D. L., . . . Brain Development Cooperative Group. (2011). Right anterior cingulate cortical thickness and bilateral striatal volume correlate with child behavior checklist aggressive behavior scores in healthy children. Biological Psychiatry, 70(3), 283-290. 10.1016/j.biopsych.2011.03.015 Link to item
  • Fonov, V., Evans, A. C., Botteron, K., Almli, C. R., McKinstry, R. C., Collins, D. L., & Brain Development Cooperative Group. (2011). Unbiased average age-appropriate atlases for pediatric studies. Neuroimage, 54(1), 313-327. 10.1016/j.neuroimage.2010.07.033 Link to item
  • Frey, S., Pandya, D. N., Chakravarty, M. M., Bailey, L., Petrides, M., & Collins, D. L. (2011). An MRI based average macaque monkey stereotaxic atlas and space (MNI monkey space). Neuroimage, 55(4), 1435-1442. 10.1016/j.neuroimage.2011.01.040 Link to item
  • Garcia-Lorenzo, D., Prima, S., Arnold, D. L., Collins, D. L., & Barillot, C. (2011). Trimmed-likelihood estimation for focal lesions and tissue segmentation in multisequence MRI for multiple sclerosis. IEEE Transactions on Medical Imaging, 30(8), 1455-1467. 10.1109/TMI.2011.2114671 Link to item
  • Hu, S., Coupe, P., Pruessner, J. C., & Collins, D. L. (2011). Appearance-based modeling for segmentation of hippocampus and amygdala using multi-contrast MR imaging. Neuroimage, 58(2), 549-559. 10.1016/j.neuroimage.2011.06.054 Link to item
  • Kim, S. H., Fonov, V., Piven, J., Gilmore, J., Vachet, C., Gerig, G., . . . The IBIS Network. (2011). Spatial intensity prior correction for tissue segmentation in the developing human brain. Proceedings.IEEE International Symposium on Biomedical Imaging, , 2049-2052. 10.1109/ISBI.2011.5872815 Link to item
  • Mercier, L., Del Maestro, R. F., Petrecca, K., Kochanowska, A., Drouin, S., Yan, C. X., . . . Collins, D. L. (2011). New prototype neuronavigation system based on preoperative imaging and intraoperative freehand ultrasound: System description and validation. International Journal of Computer Assisted Radiology and Surgery, 6(4), 507-522. 10.1007/s11548-010-0535-3 Link to item
  • Murphy, K., van Ginneken, B., Reinhardt, J. M., Kabus, S., Ding, K., Deng, X., . . . Pluim, J. P. (2011). Evaluation of registration methods on thoracic CT: The EMPIRE10 challenge. IEEE Transactions on Medical Imaging, 30(11), 1901-1920. 10.1109/TMI.2011.2158349 Link to item
  • Sadikot, A. F., Chakravarty, M. M., Bertrand, G., Rymar, V. V., Al-Subaie, F., & Collins, D. L. (2011). Creation of computerized 3D MRI-integrated atlases of the human basal ganglia and thalamus. Frontiers in Systems Neuroscience, 5, 71. 10.3389/fnsys.2011.00071 Link to item
  • Shah, M., Xiao, Y., Subbanna, N., Francis, S., Arnold, D. L., Collins, D. L., & Arbel, T. (2011). Evaluating intensity normalization on MRIs of human brain with multiple sclerosis. Medical Image Analysis, 15(2), 267-282. 10.1016/j.media.2010.12.003 Link to item
  • Yan, C. X., Goulet, B., Pelletier, J., Chen, S. J., Tampieri, D., & Collins, D. L. (2011). Towards accurate, robust and practical ultrasound-CT registration of vertebrae for image-guided spine surgery. International Journal of Computer Assisted Radiology and Surgery, 6(4), 523-537. 10.1007/s11548-010-0536-2 Link to item
  • Brans, R. G., Kahn, R. S., Schnack, H. G., van Baal, G. C., Posthuma, D., van Haren, N. E., . . . Hulshoff Pol, H. E. (2010). Brain plasticity and intellectual ability are influenced by shared genes. The Journal of Neuroscience : The Official Journal of the Society for Neuroscience, 30(16), 5519-5524. 10.1523/JNEUROSCI.5841-09.2010 Link to item
  • Caramanos, Z., Fonov, V. S., Francis, S. J., Narayanan, S., Pike, G. B., Collins, D. L., & Arnold, D. L. (2010). Gradient distortions in MRI: Characterizing and correcting for their effects on SIENA-generated measures of brain volume change. Neuroimage, 49(2), 1601-1611. 10.1016/j.neuroimage.2009.08.008 Link to item
  • Chen, S. J., Hellier, P., Gauvrit, J. Y., Marchal, M., Morandi, X., & Collins, D. L. (2010). An anthropomorphic polyvinyl alcohol triple-modality brain phantom based on Colin27. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 13(Pt 2), 92-100. Link to item
  • Collins, D. L., & Pruessner, J. C. (2010). Towards accurate, automatic segmentation of the hippocampus and amygdala from MRI by augmenting ANIMAL with a template library and label fusion. Neuroimage, 52(4), 1355-1366. 10.1016/j.neuroimage.2010.04.193 Link to item
  • Coupe, P., Manjon, J. V., Fonov, V., Pruessner, J., Robles, M., & Collins, D. L. (2010). Nonlocal patch-based label fusion for hippocampus segmentation. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 13(Pt 3), 129-136. Link to item
  • Coupe, P., Manjon, J. V., Gedamu, E., Arnold, D., Robles, M., & Collins, D. L. (2010). Robust rician noise estimation for MR images. Medical Image Analysis, 14(4), 483-493. 10.1016/j.media.2010.03.001 Link to item
  • De Nigris, D., Mercier, L., Del Maestro, R., Collins, D. L., & Arbel, T. (2010). Hierarchical multimodal image registration based on adaptive local mutual information. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 13(Pt 2), 643-651. Link to item
  • Derakhshan, M., Caramanos, Z., Giacomini, P. S., Narayanan, S., Maranzano, J., Francis, S. J., . . . Collins, D. L. (2010). Evaluation of automated techniques for the quantification of grey matter atrophy in patients with multiple sclerosis. Neuroimage, 52(4), 1261-1267. 10.1016/j.neuroimage.2010.05.029 Link to item
  • Duchesne, S., Bocti, C., De Sousa, K., Frisoni, G. B., Chertkow, H., & Collins, D. L. (2010). Amnestic MCI future clinical status prediction using baseline MRI features. Neurobiology of Aging, 31(9), 1606-1617. 10.1016/j.neurobiolaging.2008.09.003 Link to item
  • Elliott, C., Francis, S. J., Arnold, D. L., Collins, D. L., & Arbel, T. (2010). Bayesian classification of multiple sclerosis lesions in longitudinal MRI using subtraction images. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 13(Pt 2), 290-297. Link to item
  • Hellier, P., Coupe, P., Morandi, X., & Collins, D. L. (2010). An automatic geometrical and statistical method to detect acoustic shadows in intraoperative ultrasound brain images. Medical Image Analysis, 14(2), 195-204. 10.1016/j.media.2009.10.007 Link to item
  • Karimaghaloo, Z., Shah, M., Francis, S. J., Arnold, D. L., Collins, D. L., & Arbel, T. (2010). Detection of gad-enhancing lesions in multiple sclerosis using conditional random fields. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 13(Pt 3), 41-48. Link to item
  • Kish, S. J., Lerch, J., Furukawa, Y., Tong, J., McCluskey, T., Wilkins, D., . . . Boileau, I. (2010). Decreased cerebral cortical serotonin transporter binding in ecstasy users: A positron emission tomography/[(11)C]DASB and structural brain imaging study. Brain : A Journal of Neurology, 133(Pt 6), 1779-1797. 10.1093/brain/awq103 Link to item
  • Manjon, J. V., Coupe, P., Buades, A., Collins, D. L., & Robles, M. (2010). MRI superresolution using self-similarity and image priors. International Journal of Biomedical Imaging, 2010, 425891. 10.1155/2010/425891 Link to item
  • Manjon, J. V., Coupe, P., Marti-Bonmati, L., Collins, D. L., & Robles, M. (2010). Adaptive non-local means denoising of MR images with spatially varying noise levels. Journal of Magnetic Resonance Imaging : JMRI, 31(1), 192-203. 10.1002/jmri.22003 Link to item
  • Schnack, H. G., van Haren, N. E., Brouwer, R. M., van Baal, G. C., Picchioni, M., Weisbrod, M., . . . Hulshoff Pol, H. E. (2010). Mapping reliability in multicenter MRI: Voxel-based morphometry and cortical thickness. Human Brain Mapping, 31(12), 1967-1982. 10.1002/hbm.20991 Link to item
  • Tardif, C. L., Collins, D. L., Eskildsen, S. F., Richardson, J. B., & Pike, G. B. (2010). Segmentation of cortical MS lesions on MRI using automated laminar profile shape analysis. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 13(Pt 3), 181-188. Link to item
  • Tardif, C. L., Collins, D. L., & Pike, G. B. (2010). Regional impact of field strength on voxel-based morphometry results. Human Brain Mapping, 31(7), 943-957. 10.1002/hbm.20908 Link to item
  • Toews, M., Wells, W.,3rd, Collins, D. L., & Arbel, T. (2010). Feature-based morphometry: Discovering group-related anatomical patterns. Neuroimage, 49(3), 2318-2327. 10.1016/j.neuroimage.2009.10.032 Link to item
  • Aubert-Broche, B., Grova, C., Pike, G. B., & Collins, D. L. (2009). Clustering of atlas-defined cortical regions based on relaxation times and proton density. Neuroimage, 47(2), 523-532. 10.1016/j.neuroimage.2009.04.079 Link to item
  • Chakravarty, M. M., Broadbent, S., Rosa-Neto, P., Lambert, C. M., & Collins, D. L. (2009). Design, construction, and validation of an MRI-compatible vibrotactile stimulator intended for clinical use. Journal of Neuroscience Methods, 184(1), 129-135. 10.1016/j.jneumeth.2009.07.018 Link to item
  • Chakravarty, M. M., Rosa-Neto, P., Broadbent, S., Evans, A. C., & Collins, D. L. (2009). Robust S1, S2, and thalamic activations in individual subjects with vibrotactile stimulation at 1.5 and 3.0 T. Human Brain Mapping, 30(4), 1328-1337. 10.1002/hbm.20598 Link to item
  • Chakravarty, M. M., Sadikot, A. F., Germann, J., Hellier, P., Bertrand, G., & Collins, D. L. (2009). Comparison of piece-wise linear, linear, and nonlinear atlas-to-patient warping techniques: Analysis of the labeling of subcortical nuclei for functional neurosurgical applications. Human Brain Mapping, 30(11), 3574-3595. 10.1002/hbm.20780 Link to item
  • Collins, D. L., & Pruessner, J. C. (2009). Towards accurate, automatic segmentation of the hippocampus and amygdala from MRI. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 12(Pt 2), 592-600. Link to item
  • Costes, N., Dagher, A., Larcher, K., Evans, A. C., Collins, D. L., & Reilhac, A. (2009). Motion correction of multi-frame PET data in neuroreceptor mapping: Simulation based validation. Neuroimage, 47(4), 1496-1505. 10.1016/j.neuroimage.2009.05.052 Link to item
  • Coupe, P., Manjon, J. V., Gedamu, E., Arnold, D., Robles, M., & Collins, D. L. (2009). An object-based method for rician noise estimation in MR images. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 12(Pt 2), 601-608. Link to item
  • Duchesne, S., Caroli, A., Geroldi, C., Collins, D. L., & Frisoni, G. B. (2009). Relating one-year cognitive change in mild cognitive impairment to baseline MRI features. Neuroimage, 47(4), 1363-1370. 10.1016/j.neuroimage.2009.04.023 Link to item
  • Garcia-Lorenzo, D., Lecoeur, J., Arnold, D. L., Collins, D. L., & Barillot, C. (2009). Multiple sclerosis lesion segmentation using an automatic multimodal graph cuts. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 12(Pt 2), 584-591. Link to item
  • Klein, A., Andersson, J., Ardekani, B. A., Ashburner, J., Avants, B., Chiang, M. C., . . . Parsey, R. V. (2009). Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration. Neuroimage, 46(3), 786-802. 10.1016/j.neuroimage.2008.12.037 Link to item
  • Peper, J. S., Schnack, H. G., Brouwer, R. M., Van Baal, G. C., Pjetri, E., Szekely, E., . . . Hulshoff Pol, H. E. (2009). Heritability of regional and global brain structure at the onset of puberty: A magnetic resonance imaging study in 9-year-old twin pairs. Human Brain Mapping, 30(7), 2184-2196. 10.1002/hbm.20660 Link to item
  • Tardif, C. L., Collins, D. L., & Pike, G. B. (2009). Sensitivity of voxel-based morphometry analysis to choice of imaging protocol at 3 T. Neuroimage, 44(3), 827-838. 10.1016/j.neuroimage.2008.09.053 Link to item
  • Toews, M., Wells, W. M.,3rd, Collins, D. L., & Arbel, T. (2009). Feature-based morphometry. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 12(Pt 2), 109-116. Link to item
  • Wang, G., Mercier, L., Collins, D. L., & Cooperstock, J. R. (2009). A comparative study of monoscopic and stereoscopic display for a probe-positioning task. Studies in Health Technology and Informatics, 142, 417-419. Link to item
  • Amiez, C., Kostopoulos, P., Champod, A. S., Collins, D. L., Doyon, J., Del Maestro, R., & Petrides, M. (2008). Preoperative functional magnetic resonance imaging assessment of higher-order cognitive function in patients undergoing surgery for brain tumors. Journal of Neurosurgery, 108(2), 258-268. 10.3171/JNS/2008/108/2/0258 Link to item
  • Brooks, R., Collins, D. L., Morandi, X., & Arbel, T. (2008). Deformable ultrasound registration without reconstruction. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 11(Pt 2), 1023-1031. Link to item
  • Chakravarty, M. M., Sadikot, A. F., Germann, J., Bertrand, G., & Collins, D. L. (2008). Towards a validation of atlas warping techniques. Medical Image Analysis, 12(6), 713-726. 10.1016/j.media.2008.04.003 Link to item
  • Chen, J. T., Collins, D. L., Atkins, H. L., Freedman, M. S., Arnold, D. L., & Canadian MS/BMT Study Group. (2008). Magnetization transfer ratio evolution with demyelination and remyelination in multiple sclerosis lesions. Annals of Neurology, 63(2), 254-262. 10.1002/ana.21302 Link to item
  • Descoteaux, M., Collins, D. L., & Siddiqi, K. (2008). A geometric flow for segmenting vasculature in proton-density weighted MRI. Medical Image Analysis, 12(4), 497-513. 10.1016/j.media.2008.02.003 Link to item
  • Lerch, J. P., Pruessner, J., Zijdenbos, A. P., Collins, D. L., Teipel, S. J., Hampel, H., & Evans, A. C. (2008). Automated cortical thickness measurements from MRI can accurately separate alzheimer’s patients from normal elderly controls. Neurobiology of Aging, 29(1), 23-30. S0197-4580(06)00343-5 [pii]Link to item
  • Peper, J. S., Brouwer, R. M., Schnack, H. G., van Baal, G. C., van Leeuwen, M., van den Berg, S. M., . . . Hulshoff Pol, H. E. (2008). Cerebral white matter in early puberty is associated with luteinizing hormone concentrations. Psychoneuroendocrinology, 33(7), 909-915. 10.1016/j.psyneuen.2008.03.017 Link to item
  • Rousset, O. G., Collins, D. L., Rahmim, A., & Wong, D. F. (2008). Design and implementation of an automated partial volume correction in PET: Application to dopamine receptor quantification in the normal human striatum. Journal of Nuclear Medicine : Official Publication, Society of Nuclear Medicine, 49(7), 1097-1106. 10.2967/jnumed.107.048330 Link to item
  • Serban, M., Heath, E., Stroian, G., Collins, D. L., & Seuntjens, J. (2008). A deformable phantom for 4D radiotherapy verification: Design and image registration evaluation. Medical Physics, 35(3), 1094-1102. 10.1118/1.2836417 Link to item
  • Stroian, G., Martens, C., Souhami, L., Collins, D. L., & Seuntjens, J. (2008). Local correlation between monte-carlo dose and radiation-induced fibrosis in lung cancer patients. International Journal of Radiation Oncology, Biology, Physics, 70(3), 921-930. 10.1016/j.ijrobp.2007.10.033 Link to item
  • Hu, S., & Collins, D. L. (2007). Joint level-set shape modeling and appearance modeling for brain structure segmentation. Neuroimage, 36(3), 672-683. S1053-8119(06)01237-7 [pii]Link to item
  • Li, W., Kezele, I., Collins, D. L., Zijdenbos, A., Keyak, J., Kornak, J., . . . Lang, T. (2007). Voxel-based modeling and quantification of the proximal femur using inter-subject registration of quantitative CT images. Bone, 41(5), 888-895. S8756-3282(07)00553-4 [pii]Link to item
  • van Haren, N. E., Hulshoff Pol, H. E., Schnack, H. G., Cahn, W., Mandl, R. C., Collins, D. L., . . . Kahn, R. S. (2007). Focal gray matter changes in schizophrenia across the course of the illness: A 5-year follow-up study. Neuropsychopharmacology : Official Publication of the American College of Neuropsychopharmacology, 32(10), 2057-2066. 1301347 [pii]Link to item
  • Aubert-Broche, B., Griffin, M., Pike, G. B., Evans, A. C., & Collins, D. L. (2006). Twenty new digital brain phantoms for creation of validation image data bases. IEEE Transactions on Medical Imaging, 25(11), 1410-1416. 10.1109/TMI.2006.883453 Link to item
  • Aubert-Broche, B., Grova, C., Reilhac, A., Evans, A. C., & Collins, D. L. (2006). Realistic simulated MRI and SPECT databases. application to SPECT/MRI registration evaluation. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 9(Pt 1), 330-337. Link to item
  • Chakravarty, M. M., Bertrand, G., Hodge, C. P., Sadikot, A. F., & Collins, D. L. (2006). The creation of a brain atlas for image guided neurosurgery using serial histological data. Neuroimage, 30(2), 359-376. S1053-8119(05)00699-3 [pii]Link to item
  • Chakravarty, M. M., Sadikot, A. F., Mongia, S., Bertrand, G., & Collins, D. L. (2006). Towards a multi-modal atlas for neurosurgical planning. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 9(Pt 2), 389-396. Link to item
  • Fu, L., Fonov, V., Pike, B., Evans, A. C., & Collins, D. L. (2006). Automated analysis of multi site MRI phantom data for the NIHPD project. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 9(Pt 2), 144-151. Link to item
  • Grabner, G., Janke, A. L., Budge, M. M., Smith, D., Pruessner, J., & Collins, D. L. (2006). Symmetric atlasing and model based segmentation: An application to the hippocampus in older adults. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 9(Pt 2), 58-66. Link to item
  • Hulshoff Pol, H. E., Schnack, H. G., Mandl, R. C., Brans, R. G., van Haren, N. E., Baare, W. F., . . . Kahn, R. S. (2006). Gray and white matter density changes in monozygotic and same-sex dizygotic twins discordant for schizophrenia using voxel-based morphometry. Neuroimage, 31(2), 482-488. S1053-8119(05)02593-0 [pii]Link to item
  • Hulshoff Pol, H. E., Schnack, H. G., Posthuma, D., Mandl, R. C., Baare, W. F., van Oel, C., . . . Kahn, R. S. (2006). Genetic contributions to human brain morphology and intelligence. The Journal of Neuroscience : The Official Journal of the Society for Neuroscience, 26(40), 10235-10242. 26/40/10235 [pii]Link to item
  • Toews, M., Collins, D. L., & Arbel, T. (2006). A statistical parts-based appearance model of inter-subject variability. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 9(Pt 1), 232-240. Link to item
  • Chakravarty, M. M., Sadikot, A. F., Germann, J., Bertrand, G., & Collins, D. L. (2005). Anatomical and electrophysiological validation of an atlas for neurosurgical planning. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 8(Pt 2), 394-401. Link to item
  • Duchesne, S., Caroli, A., Geroldi, C., Frisoni, G. B., & Collins, D. L. (2005). Predicting clinical variable from MRI features: Application to MMSE in MCI. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 8(Pt 1), 392-399. Link to item
  • Mercier, L., Lango, T., Lindseth, F., & Collins, D. L. (2005). A review of calibration techniques for freehand 3-D ultrasound systems. Ultrasound in Medicine & Biology, 31(4), 449-471. S0301-5629(05)00119-5 [pii]Link to item
  • Toews, M., Collins, D. L., & Arbel, T. (2005). Maximum a posteriori local histogram estimation for image registration. Medical Image Computing and Computer-Assisted Intervention : MICCAI …International Conference on Medical Image Computing and Computer-Assisted Intervention, 8(Pt 2), 163-170. Link to item
  • Arbel, T., Morandi, X., Comeau, R. M., & Collins, D. L. (2004). Automatic non-linear MRI-ultrasound registration for the correction of intra-operative brain deformations. Computer Aided Surgery : Official Journal of the International Society for Computer Aided Surgery, 9(4), 123-136. Q3T1125T455U5077 [pii]Link to item
  • Hulshoff Pol, H. E., Schnack, H. G., Mandl, R. C., Cahn, W., Collins, D. L., Evans, A. C., & Kahn, R. S. (2004). Focal white matter density changes in schizophrenia: Reduced inter-hemispheric connectivity. Neuroimage, 21(1), 27-35. S105381190300572X [pii]Link to item
  • Robbins, S., Evans, A. C., Collins, D. L., & Whitesides, S. (2004). Tuning and comparing spatial normalization methods. Medical Image Analysis, 8(3), 311-323. 10.1016/j.media.2004.06.009 Link to item
  • Antel, S. B., Collins, D. L., Bernasconi, N., Andermann, F., Shinghal, R., Kearney, R. E., . . . Bernasconi, A. (2003). Automated detection of focal cortical dysplasia lesions using computational models of their MRI characteristics and texture analysis. Neuroimage, 19(4), 1748-1759. S105381190300226X [pii]Link to item
  • Antel, S. B., Bernasconi, A., Bernasconi, N., Collins, D. L., Kearney, R. E., Shinghal, R., & Arnold, D. L. (2002). Computational models of MRI characteristics of focal cortical dysplasia improve lesion detection. Neuroimage, 17(4), 1755-1760. S1053811902913121 [pii]Link to item
  • Atkinson, J. D., Collins, D. L., Bertrand, G., Peters, T. M., Pike, G. B., & Sadikot, A. F. (2002). Optimal location of thalamotomy lesions for tremor associated with parkinson disease: A probabilistic analysis based on postoperative magnetic resonance imaging and an integrated digital atlas. Journal of Neurosurgery, 96(5), 854-866. 10.3171/jns.2002.96.5.0854 Link to item
  • Pruessner, J. C., Kohler, S., Crane, J., Pruessner, M., Lord, C., Byrne, A., . . . Evans, A. C. (2002). Volumetry of temporopolar, perirhinal, entorhinal and parahippocampal cortex from high-resolution MR images: Considering the variability of the collateral sulcus. Cerebral Cortex (New York, N.Y.: 1991), 12(12), 1342-1353. Link to item

0 voters

Show results